Complete target sequences of most conventional MLPA probes can be found in an Excel file titled Probe sequences, which can be found under the heading Other product documentation on the relevant product page. This section can either be found in the Product documentation block or in the download list on the right-hand side of the product page. Information about ligation sites can either be found in the aforementioned file or in the product description, depending on the product.

Complete target sequences of digitalMLPA probes are not available, but the Probe Information File (PIF) of the probemix contains partial target locations of most probes.

The exact target sequence of some (digital)MLPA probes is not available, as this is considered proprietary information.